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Colonoscopy prep with an anal fissure

Added · 6 October 2026 ·How we create our content

At a glance

Bowel prep means hours of watery stool. With a fissure, that can sound frightening.

Many people say the reality was easier than the dread. Nothing hard passes, which is often the fissure’s main problem. What people complain about most is sore, burning skin from so many trips to the toilet.

The main themes in the accounts:

  • People protected the skin before the prep started, not after it hurt.
  • Gentle cleaning mattered more than any product.
  • Telling the endoscopy unit about the fissure changed how the day went.
  • How the fissure was afterwards varied, from better to briefly worse.

This guide describes what people report. It does not tell you how to take your prep. Your unit’s instructions always come first.

Why a colonoscopy comes up with a fissure

People often ask why they need a scope when the problem is “only” a fissure. The reasons they are given tend to fall into a few groups.

  • Bleeding that does not fit the fissure, or that continues after healing
  • A fissure that is in an unusual place, or slow to heal
  • A change in bowel habit, or diarrhoea that needs explaining
  • Family history of bowel cancer or inflammatory bowel disease
  • Age-based screening that happens to fall at the same time

Several people describe the test finding something else that explained part of their symptoms, such as internal haemorrhoids, a polyp or inflammation. Others were simply reassured. Both are useful outcomes.

What people describe about the prep

The burning. The most common report is stinging skin after repeated watery stools. It tends to build through the evening rather than start straight away.

The fissure itself. Many say the fissure hurt less than with a normal bowel movement. Some still had spasm afterwards, especially if the fissure was in an active phase.

The timing. People describe the prep taking longer than expected to start working, then coming in waves. Some were caught out by how long it went on into the night or the morning.

The low-fibre days. Some units ask people to eat low-fibre food or stop fibre supplements for a few days before. People with a fissure often worry this will firm up their stools before the prep starts. This is worth raising with the unit, especially if you normally rely on a stool softener. They can tell you what to keep taking and what to stop.

How people looked after their skin

These are patterns from many anonymised accounts, not instructions.

  • A barrier before the first trip. Petroleum jelly or a zinc-based barrier cream on the outside skin was the single most mentioned tip. People reapplied it after cleaning.
  • Water, not rubbing. Many rinsed with water, used a shower head or a bath, then patted dry. Others used soft, fragrance-free wipes.
  • Setting up the bathroom. People mention having everything within reach: soft paper, wipes, barrier cream, something to drink, something to read.
  • Cool rather than hot. Some found a lukewarm rinse eased the stinging. Very hot water seemed to make it worse for others.

If you use a prescribed fissure cream, ask the unit whether to carry on through the prep and on the day.

What to tell the endoscopy unit

People who raised the fissure ahead of time generally had a better experience. Things they mentioned or asked about:

  • That they have a fissure, where it is, and how sore it is right now
  • Whether the scope could be passed especially gently, with plenty of gel
  • Whether a smaller scope was an option
  • What sedation was available, and whether they could have it
  • Whether to keep using their fissure treatment and stool softener
  • Whether anything else, such as Botox or an examination, could be done at the same time

A sigmoidoscopy is a slightly different case. It is often done without sedation, and some units use an enema rather than drinkable prep. People with a very sore fissure describe this as harder. Several asked whether the test could be done with sedation, or whether waiting was safe. The clinician who requested the test is the person to ask.

Combining procedures

Some people had Botox, an examination under anaesthetic or other fissure treatment during the same session as the scope. The appeal is one prep, one sedation and one recovery.

Whether this is possible depends on your hospital, whether the same team does both, and how urgent each procedure is. People who wanted this usually had to ask for it. It did not always happen automatically.

How the fissure was afterwards

Accounts split into a few patterns.

  • No change. Many people noticed no difference to the fissure at all.
  • Briefly better. Some describe a spell of easier, softer bowel movements in the days after. For a few, this did not last once normal stools returned.
  • A short flare. Some had soreness, a small amount of fresh bleeding or more spasm for a few days.
  • Slow to restart. The bowel is empty after prep, so the first normal stool can take a day or two. People often say this first one felt firmer than expected.

People commonly went back to their usual softener routine and fluids straight after, once the unit had confirmed it was fine to do so.

When to seek care

Call 999 or go to A&E straight away if bleeding is heavy, if you feel faint or become confused, or if you have severe tummy pain, a swollen or hard tummy, or a high temperature after the scope. Do not wait to reach the unit first.

Contact the unit, your GP or NHS 111 (or your local urgent care line) if you notice:

  • Bleeding that does not stop
  • Vomiting that means you cannot keep the prep or fluids down
  • Dizziness or passing very little urine during the prep
  • Severe anal pain that keeps getting worse rather than settling
  • Swelling, discharge or fever that could mean infection

See your GP or clinician if the fissure flares after the test and does not settle within a week or two, or if the scope found something you do not yet understand.

When to seek care Heavy bleeding or feeling faint? Get emergency help now. Emergency: 911

Not sure how urgent it is? Get help today.

  1. Emergency

    Heavy bleeding, black tarry stools, feeling faint, severe pain or trouble breathing.

    Call 911 or go to the ER.

  2. Today

    Fever, pain getting worse, a hot swollen lump, or trouble passing urine.

    Call your doctor or go to urgent care.

  3. Soon

    Bleeding or bowel changes nobody has checked, or anything lasting 3 weeks.

    Book a doctor’s appointment.

Feeling overwhelmed? Call or text 988, any time.

See all the signs

For this topic, get medical advice if you notice:

  • Heavy or persistent bleeding that does not settle
  • Severe pain that is getting worse rather than better
  • Fever, swelling or discharge that could mean infection
  • Severe tummy pain, a swollen or hard tummy, or a high temperature after the scope: call 999 or go to A&E
  • Confusion, feeling faint, or passing very little urine during the prep: call 999 or go to A&E

Recording how you feel is not the same as being checked. These are the signs that need a doctor’s attention.

Call 911 or go to the emergency room now if you have:

  • bleeding that will not stop, a lot of blood (the toilet water turns red, or you pass large clots), or any bleeding with feeling faint or dizzy
  • fainting, a racing heart or trouble breathing
  • confusion or slurred speech, extreme shivering, no urine in a day, or blotchy skin
  • sudden severe belly pain, or a swollen, hard belly with vomiting or not passing stool or gas
  • you cannot pass urine at all, or your bladder feels full and painful and you can’t empty it
  • redness, swelling or severe pain spreading quickly around your anus, genitals or groin, especially with a fever or feeling very ill
  • a fever with a painful swelling near your anus if you have diabetes or a weakened immune system (for example, from chemotherapy or transplant medicines)
  • black, tarry stools

Call your doctor or go to urgent care today (or the ER if you can’t be seen today) if you have:

  • a temperature of 100.4°F (38°C) or higher, chills, vomiting, or feeling generally unwell
  • pain that is getting worse over days, or severe pain that stops you sitting or sleeping
  • a hot, swollen or very tender lump near your anus or at the top of the crease between your buttocks, or foul-smelling discharge
  • trouble urinating
  • bleeding that is getting heavier or more frequent, or blood mixed into your stool
  • feeling much more tired than usual, looking pale, or getting out of breath more easily than you used to
  • not passing stool for several days, or new belly pain

Make an appointment with your doctor if:

  • you have never had these symptoms checked by a doctor or nurse — whatever your age
  • you have had rectal bleeding for more than 3 weeks
  • your bowel movements have been looser, thinner or more frequent than usual for 3 weeks or more, or you have lost weight without trying
  • symptoms have not settled after a week or so, or keep coming back
  • you notice a new lump near your anus, between your buttocks or in your belly, or an itch or discharge that does not clear
  • you have new leakage or trouble controlling your bowels
  • you are 45 or over, or have a family history of bowel cancer or inflammatory bowel disease, and any of these symptoms are new for you

If you are unsure, it is always reasonable to ask. If things feel overwhelming, call or text 988 (Suicide & Crisis Lifeline) or chat at 988lifeline.org, any time. If you don’t feel safe, call 911.

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