More guides and experiences about Anal fistula. Explore all →

Fistula surgery: incontinence risk

Published 13 March 2026 ·Last reviewed 13 March 2026 by the editorial team ·How we create our content

At a glance

Incontinence risk is the most significant concern for people facing fistula surgery. It is a legitimate concern that deserves honest, clear information. This guide covers what the risk actually involves, how it varies by procedure type, and how to have a productive conversation with your surgeon about it.

Understanding the risk

Why the risk exists

The anal sphincter muscles control continence. Fistula surgery sometimes involves operating on or near these muscles. When sphincter muscle is divided — as in a fistulotomy — there is a risk that continence may be affected.

The risk depends on:

  • How much sphincter is involved — a superficial fistula involving minimal sphincter carries low risk; a complex fistula involving significant sphincter carries higher risk
  • The surgical technique — fistulotomy (laying open) divides muscle; sphincter-preserving techniques (advancement flap, LIFT) do not
  • Previous surgery — the cumulative effect of multiple operations on the sphincter increases risk
  • Baseline sphincter function — people with pre-existing weak sphincters (from childbirth, age, or other factors) may be at higher risk

What incontinence looks like in practice

When continence changes occur after fistula surgery, they most commonly present as:

  • Difficulty controlling gas — the most common and mildest form. This means gas passes unexpectedly rather than being held until an appropriate moment.
  • Minor soiling — small amounts of mucus or stool on underwear. Often manageable with pads and does not significantly affect daily life.
  • Urgency — less time between feeling the need to go and needing to reach a toilet. This is less common.
  • Significant faecal incontinence — inability to control bowel movements. This is uncommon with modern surgical techniques and experienced surgeons.

The numbers in context

Reported incontinence rates vary widely in medical literature depending on how incontinence is defined and measured:

  • Simple fistulotomy for superficial fistulas: low risk — most studies report rates in single digits
  • Complex fistula surgery: higher risk, which is why sphincter-preserving techniques are used
  • Sphincter-preserving techniques: designed specifically to minimise this risk

Your surgeon can provide specific data relevant to your fistula type and the planned procedure.

Surgical techniques and how they relate to risk

Fistulotomy

The fistula tract is laid open. Effective but involves dividing sphincter muscle. Generally reserved for simple, superficial fistulas where minimal muscle is involved.

Seton placement

A thread placed through the fistula tract. Does not divide the sphincter in one step. May be used as a staged approach before definitive repair.

Advancement flap

Healthy tissue is moved to cover the internal opening of the fistula. Does not divide the sphincter. Used for complex fistulas where sphincter preservation is a priority.

LIFT procedure

The fistula tract is tied off between the sphincter muscles. Preserves the sphincter. Increasingly used for appropriate fistula types.

Having the conversation with your surgeon

Questions to ask

  • What type of fistula do I have, and how much sphincter is involved?
  • What surgical technique do you recommend, and why?
  • What is the specific incontinence risk for this procedure?
  • What sphincter-preserving options are available?
  • What is your personal experience and success rate with this procedure?
  • What continence changes should I watch for and report after surgery?
  • What options exist if incontinence does occur?

What to listen for

A good surgeon will:

  • Discuss the risk honestly without minimising or catastrophising
  • Explain their technique choice and the rationale behind it
  • Have experience with the procedure they are recommending
  • Describe what they would do differently if the first approach does not work
  • Welcome your questions and take them seriously

If changes occur after surgery

If you notice any changes in gas control, soiling, or urgency after fistula surgery:

  • Report it to your surgical team — they need to know
  • Keep a log — when it happens, how often, what triggers it
  • Understand that some changes are temporary — mild gas control issues in the early weeks may resolve as healing completes
  • If changes persist — pelvic floor exercises, biofeedback therapy, and other interventions can help
  • Do not suffer in silence — this is a known risk, and there are management options

Common questions

Does fistula surgery cause incontinence?

The risk exists but varies significantly depending on the type of surgery and the complexity of the fistula. Simple fistulotomy for superficial fistulas carries a low risk. Complex fistulas involving more of the sphincter muscle carry higher risk, which is why surgeons use sphincter-preserving techniques for these cases. Your surgeon can discuss the specific risk for your situation.

What does incontinence after fistula surgery look like?

When it occurs, it most commonly involves difficulty controlling gas (flatus incontinence), which is the mildest form. Less commonly, it may involve minor soiling or leakage. Significant faecal incontinence is uncommon with modern surgical techniques. Most changes, when they occur, are mild and may improve over time.

How do surgeons minimise the risk?

For complex fistulas, surgeons use sphincter-preserving techniques — advancement flaps, LIFT procedure, setons — that avoid cutting through the sphincter muscle. The choice of technique is based on the anatomy of the fistula and the goal of balancing effective treatment with continence preservation.

What questions should I ask my surgeon about incontinence risk?

Useful questions include: What is the specific risk for my type of fistula and the planned procedure? What technique will you use and how does it protect the sphincter? What percentage of your patients experience continence changes? What options do we have if the first approach does not work? What should I report after surgery?

When to seek care Heavy bleeding or feeling faint? Get emergency help now. Emergency: 911

Not sure how urgent it is? Get help today.

  1. Emergency

    Heavy bleeding, black tarry stools, feeling faint, severe pain or trouble breathing.

    Call 911 or go to the ER.

  2. Today

    Fever, pain getting worse, a hot swollen lump, or trouble passing urine.

    Call your doctor or go to urgent care.

  3. Soon

    Bleeding or bowel changes nobody has checked, or anything lasting 3 weeks.

    Book a doctor’s appointment.

Feeling overwhelmed? Call or text 988, any time.

See all the signs

For this topic, get medical advice if you notice:

  • Difficulty controlling gas or bowel movements after surgery
  • Soiling or leakage that was not present before surgery
  • Any change in continence — report to your surgical team

Recording how you feel is not the same as being checked. These are the signs that need a doctor’s attention.

Call 911 or go to the emergency room now if you have:

  • bleeding that will not stop, a lot of blood (the toilet water turns red, or you pass large clots), or any bleeding with feeling faint or dizzy
  • fainting, a racing heart or trouble breathing
  • confusion or slurred speech, extreme shivering, no urine in a day, or blotchy skin
  • sudden severe belly pain, or a swollen, hard belly with vomiting or not passing stool or gas
  • you cannot pass urine at all, or your bladder feels full and painful and you can’t empty it
  • redness, swelling or severe pain spreading quickly around your anus, genitals or groin, especially with a fever or feeling very ill
  • a fever with a painful swelling near your anus if you have diabetes or a weakened immune system (for example, from chemotherapy or transplant medicines)
  • black, tarry stools

Call your doctor or go to urgent care today (or the ER if you can’t be seen today) if you have:

  • a temperature of 100.4°F (38°C) or higher, chills, vomiting, or feeling generally unwell
  • pain that is getting worse over days, or severe pain that stops you sitting or sleeping
  • a hot, swollen or very tender lump near your anus or at the top of the crease between your buttocks, or foul-smelling discharge
  • trouble urinating
  • bleeding that is getting heavier or more frequent, or blood mixed into your stool
  • feeling much more tired than usual, looking pale, or getting out of breath more easily than you used to
  • not passing stool for several days, or new belly pain

Make an appointment with your doctor if:

  • you have never had these symptoms checked by a doctor or nurse — whatever your age
  • you have had rectal bleeding for more than 3 weeks
  • your bowel movements have been looser, thinner or more frequent than usual for 3 weeks or more, or you have lost weight without trying
  • symptoms have not settled after a week or so, or keep coming back
  • you notice a new lump near your anus, between your buttocks or in your belly, or an itch or discharge that does not clear
  • you have new leakage or trouble controlling your bowels
  • you are 45 or over, or have a family history of bowel cancer or inflammatory bowel disease, and any of these symptoms are new for you

If you are unsure, it is always reasonable to ask. If things feel overwhelming, call or text 988 (Suicide & Crisis Lifeline) or chat at 988lifeline.org, any time. If you don’t feel safe, call 911.

Showing US care routes. Change region at the foot of the page.

Related symptoms

Discreet symptom tracking

Symptoms that come and go? Keep track, day by day.

For hemorrhoids, fissures, fistulas and other anal and rectal problems. A short, discreet email asks how things have been, and saves each answer, so you can look back at every flare and every good week in your own words. If you haven’t had your symptoms checked, see your doctor first.

  • About ten seconds a check-in. No app, no password.
  • Nothing in the subject or preview says what it’s about.
  • Each Sunday, a link to your week, ready for your next appointment.

Your notes

Your check-in

Takes about ten seconds.

20:00
Example. Nothing on the lock screen hints at symptoms or conditions.

Explore more